Improve scripts for full K catalogue scans
This commit is contained in:
Jean-Sébastien
parent
4f45ab3ee0
commit
5e22173316
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#! /bin/zsh
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# We use zsh here to support floats (not supported in bash)
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# This script produces a whole stack of subdirectories,
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# for a range of values of c centered on 4 with 8 up/down factors of 2,
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# and momenta in range from 0 to nkmax * kF/4.
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# For each c, the LiebLin_Catalogue_Fixed_c_Nscaling
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# executable is invoked, which computes up to the highest N possible in the allocated time.
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# This script is restartable: a new run will pick up where a previous left off,
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# provided the previous run terminated cleanly.
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if [[ $# -ne 5 ]]; then
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echo "Arguments needed: whichDSF, kBT, target_sumrule, nkmax (max momentum in units of kF/4), nr_minutes (for each c value)."
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exit 1
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fi
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if [[ $1 != 'd' && $1 != 'g' && $1 != 'o' ]]; then
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echo "Only the d, g and o scanning options are implemented."
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exit 1
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fi
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if [[ $2 -lt 0 ]]; then
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echo "Temperature kBT must be > 0."
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exit 1
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fi
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if [[ $3 -lt 0 || $3 -gt 1 ]]; then
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echo "Requirement: 0 < target_sumrule < 1."
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exit 1
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fi
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if [[ $4 -lt 0 ]]; then
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echo "nkmax must be > 0."
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exit 1
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fi
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if [[ $5 -lt 1 ]]; then
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echo "Please give a positive nr_minutes."
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exit 1
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fi
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zmodload zsh/datetime
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whichDSF=$1
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kBT=$2
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target_sumrule=$3
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nkmax=$4
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nr_minutes=$5
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correlator='rho-rho'
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if [[ $whichDSF == 'o' ]]; then
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correlator='psidag-psi'
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elif [[ $whichDSF == 'g' ]]; then
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correlator='psi-psidag'
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fi
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mkdir -p logs
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logfile='logs/c_fixed_N_prog_'$whichDSF'_kBT_'$kBT'_sr_'$target_sumrule'_nkmax_'$nkmax'_nr_minutes_'$nr_minutes'_'$(date '+%Y-%m-%d-%Hh%M')'.log'
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touch $logfile
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clist=(0.015625 0.03125 0.0625 0.125 0.25 0.5 1 2 4 8 16 32 64 128 256 512 1024)
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basedir="$(pwd)"
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for c in $clist
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do
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echo '** Starting run for c =' $c | tee -a $logfile
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dir='Lieb-Liniger/'$correlator'/T_'$kBT'/c_fixed_N_prog/c_'$c'/k_0_to_'${(l:2::0:)nkmax}'kFo4/sr_'$target_sumrule'/prelim'
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mkdir -p $dir
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cd $dir
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LiebLin_Catalogue_Fixed_c_Nscaling $whichDSF $c $nkmax $kBT $target_sumrule 0 $nr_minutes | tee -a $basedir/$logfile
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cd $basedir
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echo '++ Successfully completed run for c =' $c'.\n' | tee -a $logfile
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done
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echo '\n\n++ Successfully completed c_fixed_N_prog_data on '$(date '+%Y-%m-%d-%Hh%M')'.\n' | tee -a $logfile
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#! /bin/zsh
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# We use zsh here to support floats (not supported in bash)
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# This script produces the .dsfs files and figures for the `c_fixed_N_prog` runs
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# which achieved the required sumrule saturation.
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if [[ $# -ne 5 ]]; then
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echo "Arguments needed: whichDSF, kBT, target_sumrule, nkmax (max momentum in units of kF/4), width."
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exit 1
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fi
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if [[ $1 != 'd' && $1 != 'g' && $1 != 'o' ]]; then
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echo "Only the d, g and o scanning options are implemented."
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exit 1
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fi
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if [[ $2 -lt 0 ]]; then
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echo "Temperature kBT must be > 0."
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exit 1
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fi
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if [[ $3 -lt 0 || $3 -gt 1 ]]; then
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echo "Requirement: 0 < target_sumrule < 1."
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exit 1
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fi
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if [[ $4 -lt 0 ]]; then
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echo "nkmax must be > 0."
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exit 1
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fi
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if [[ $5 -lt 0 ]]; then
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echo "width must be > 0."
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exit 1
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fi
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whichDSF=$1
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kBT=$2
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target_sumrule=$3
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nkmax=$4
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width=$5
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correlator='rho-rho'
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if [[ $whichDSF == 'o' ]]; then
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correlator='psidag-psi'
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elif [[ $whichDSF == 'g' ]]; then
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correlator='psi-psidag'
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fi
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clist=(0.015625 0.03125 0.0625 0.125 0.25 0.5 1 2 4 8 16 32 64 128 256 512 1024)
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basedir="$(pwd)"
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ommin=0
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ommax=$(($nkmax*($nkmax - 8))) # use lower branch of 1ph continuum
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Nom=1000
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for c in $clist
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do
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echo 'Starting computation of DSFs for c =' $c
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dir='Lieb-Liniger/'$correlator'/T_'$kBT'/c_fixed_N_prog/c_'$c'/k_0_to_'${(l:2::0:)nkmax}'kFo4/sr_'$target_sumrule'/store/data'
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cd $dir
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for datadir in *
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do
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cd $datadir
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N=${datadir#"N_"}
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iKmax=$(($nkmax * $N/8))
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Smoothen_LiebLin_DSF_Scaled $whichDSF $c $N $N 0 $iKmax $kBT 0 $ommin $ommax $Nom $width
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cd ..
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done
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cd $basedir
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echo ' Successfully computed DSFs for c =' $c
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done
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#! /bin/zsh
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# We use zsh here to support floats (not supported in bash)
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# This script produces the .dsfs files and figures for the `c_fixed_N_prog` runs
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# which achieved the required sumrule saturation.
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if [[ $# -ne 5 ]]; then
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echo "Arguments needed: whichDSF, kBT, target_sumrule, nkmax (max momentum in units of kF/4), width."
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exit 1
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fi
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if [[ $1 != 'd' && $1 != 'g' && $1 != 'o' ]]; then
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echo "Only the d, g and o scanning options are implemented."
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exit 1
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fi
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if [[ $2 -lt 0 ]]; then
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echo "Temperature kBT must be > 0."
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exit 1
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fi
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if [[ $3 -lt 0 || $3 -gt 1 ]]; then
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echo "Requirement: 0 < target_sumrule < 1."
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exit 1
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fi
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if [[ $4 -lt 0 ]]; then
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echo "nkmax must be > 0."
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exit 1
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fi
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if [[ $5 -lt 0 ]]; then
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echo "width must be > 0."
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exit 1
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fi
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whichDSF=$1
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kBT=$2
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target_sumrule=$3
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nkmax=$4
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width=$5
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correlator='rho-rho'
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if [[ $whichDSF == 'o' ]]; then
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correlator='psidag-psi'
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elif [[ $whichDSF == 'g' ]]; then
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correlator='psi-psidag'
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fi
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clist=(0.015625 0.03125 0.0625 0.125 0.25 0.5 1 2 4 8 16 32 64 128 256 512 1024)
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basedir="$(pwd)"
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ommin=0
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ommax=$(($nkmax*($nkmax - 8))) # use lower branch of 1ph continuum
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Nom=1000
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for c in $clist
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do
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echo 'Starting plotting of DSFs for c =' $c
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dir='Lieb-Liniger/'$correlator'/T_'$kBT'/c_fixed_N_prog/c_'$c'/k_0_to_'${(l:2::0:)nkmax}'kFo4/sr_'$target_sumrule'/store/data'
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cd $dir
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for datadir in *
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do
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cd $datadir
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N=${datadir#"N_"}
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mkdir -p ../../plots/N_$N
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cd ../../plots/N_$N
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# Move all K_, Omega_ and .dsfs files here
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mv ../../data/N_$N/K_* .
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mv ../../data/N_$N/Omega_* .
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mv ../../data/N_$N/*dsfs .
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# Find the K and Omega file
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for file in *
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do
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if [[ $file = Omega* ]]; then
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omegafile=$file
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elif [[ $file = K_* ]]; then
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kfile=$file
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fi
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done
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# For each .dsfs file, plot
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for file in *_w_$width.dsfs
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do
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echo 'Found file ' $file
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# invoke the python script
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plot_dsf_k_range.py $kfile $omegafile $file
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done
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cd ../../data
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done
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cd $basedir
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echo ' Successfully computed DSFs for c =' $c
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done
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@ -0,0 +1,82 @@
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#! /usr/bin/env python
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"""
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Plot DSF.
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Usage: c_scan_N_fixed_animation.py [N] [width]
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"""
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import glob
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import matplotlib.pyplot as plt
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import matplotlib.animation as animation
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import numpy as np
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import os
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import sys
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N = str(sys.argv[1])
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width = str(sys.argv[2])
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# Get the list of interactions which have been computed
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dirlist = os.listdir('../../data/N_%s' % N)
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clist = sorted([float(c.lstrip('c_')) for c in dirlist])
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# Get the K file
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kfile = glob.glob('../../data/N_%s/c_%s*/K_*' % (N, str(clist[0]).rstrip('.0')[:12]))[0]
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k = np.loadtxt(kfile)
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# Get the Omega file
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omegafile = glob.glob('../../data/N_%s/c_%s*/Omega*' % (N, str(clist[0]).rstrip('.0')[:12]))[0]
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omega = np.loadtxt(omegafile)
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# Load all the available dsfs from the data store
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dsfs = {}
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for c in clist:
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# Do some black magic here: for matching the interaction,
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# first try for exact match, stripping '.0' to treat integer values, e.g. 4.0 into 4
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# and then (if it doesn't work) use only the first 12 characters, plus wildcard, to cover rounding errors
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try:
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dsffile = glob.glob('../../data/N_%s/c_%s/*_w_%s.dsfs' % (N, str(c).rstrip('.0'), width))[0]
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except IndexError:
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dsffile = glob.glob('../../data/N_%s/c_%s*/*_w_%s.dsfs' % (N, str(c).rstrip('.0')[:12], width))[0]
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dsfs[str(c)] = np.loadtxt(dsffile)
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# Read some useful parameters from (last) file name:
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elements = dsffile.rpartition('/')[2].split('_')
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L = elements[5]
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#N = elements[7]
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iKmax = elements[14]
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width = elements[22].rpartition('.')[0]
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# which leads to
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rho = int(N)/int(L)
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fig, ax = plt.subplots()
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# To determine the y axis limits, we look at the lowest value of c (sharpest peak)
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dsfsmax = 0.5
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ymax = omega[-1]
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xtext = 0.05 * k[-1]
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ytext = 0.9 * ymax
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ax.text(xtext, ytext, f'c = {clist[0]:10.6f}', color='white', fontsize='large')
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pcm = ax.pcolormesh(k, omega, dsfs[str(clist[0])], vmax=dsfsmax)
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fig.colorbar(pcm, ax=ax)
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def animate(i):
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ax.clear()
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ax.set_title(f'c scan, rho={rho} (N={N}), w={width}', fontsize='x-large')
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ax.text(xtext, ytext, f'c = {clist[i]:10.6f}', color='white', fontsize='x-large')
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ax.pcolormesh(k, omega, dsfs[str(clist[i])], vmax=dsfsmax)
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ani = animation.FuncAnimation(fig, animate, frames=len(clist), interval=100, repeat=False)
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outfilename = (dsffile.partition('_c_')[0].rpartition('/')[2] + '_c_scan_' +
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dsffile.partition('_c_')[2].partition('_')[2].partition('.dsfs')[0])
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ani.save(outfilename + '.mp4')
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with open(outfilename + '.html', 'w') as file:
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file.write(ani.to_html5_video())
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#plt.show()
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@ -0,0 +1,94 @@
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#! /bin/zsh
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# For given N (L), this
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# computes the required DSF (up to required sumrule)
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# over a range of values of c_int.
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# The data can then be used to produce animated graphs (with c_int evolving),
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# see the `c_scan_N_fixed_dsfs[_plot]` scripts.
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if [[ $# -ne 5 ]]; then
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echo "Arguments needed: whichDSF, kBT, target_sumrule, N, nkmax (max momentum in units of kF/4)."
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exit 1
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fi
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if [[ $1 != 'd' && $1 != 'g' && $1 != 'o' ]]; then
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echo "Only the d, g and o scanning options are implemented."
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exit 1
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fi
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if [[ $2 -lt 0 ]]; then
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echo "Temperature kBT must be > 0."
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exit 1
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fi
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if [[ $3 -lt 0 || $3 -gt 1 ]]; then
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echo "Requirement: 0 < target_sumrule < 1."
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exit 1
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fi
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if [[ $4 -lt 0 ]]; then
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echo "N must be > 0."
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exit 1
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fi
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if [[ $5 -lt 0 ]]; then
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echo "nkmax must be > 0."
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exit 1
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fi
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whichDSF=$1
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kBT=$2
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target_sumrule=$3
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N=$4
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nkmax=$5
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correlator='rho-rho'
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if [[ $whichDSF == 'o' ]]; then
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correlator='psidag-psi'
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elif [[ $whichDSF == 'g' ]]; then
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correlator='psi-psidag'
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fi
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mkdir -p logs
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logfile='logs/c_scan_N_fixed_'$whichDSF'_kBT_'$kBT'_sr_'$target_sumrule'_N_'$N'_nkmax_'$nkmax'_'$(date '+%Y-%m-%d-%Hh%M')'.log'
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touch $logfile
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iKmax=$(($nkmax * $N/8))
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Max_Secs=3600
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refine=0
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# List of interactions: fractional powers of 2
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clist_raw=()
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for nc in {-160..160}
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do
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clist_raw=($clist_raw $(( 2**($nc/16.) )))
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done
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# Now cast the integer values to true integers
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zmodload zsh/mathfunc
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clist=()
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for c in $clist_raw
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do
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if [[ $((floor($c))) == $((ceil($c))) ]]; then
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clist=($clist $((int($c))))
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else
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clist=($clist $c)
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fi
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done
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basedir="$(pwd)"
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for c in $clist
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do
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echo '** Starting run for c =' $c', N = '$N | tee -a $logfile
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dir='Lieb-Liniger/'$correlator'/T_'$kBT'/c_scan_N_fixed/k_0_to_'${(l:2::0:)nkmax}'kFo4/sr_'$target_sumrule'/store/data/N_'$N'/c_'$c
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mkdir -p $dir
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cd $dir
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LiebLin_DSF $whichDSF $c $N $N 0 $iKmax $kBT $Max_Secs $target_sumrule $refine
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cd $basedir
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echo '++ Successfully computed DSFs for c =' $c', N = '$N'.\n' | tee -a $logfile
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done
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echo '\n\n++ Successfully completed c_scan_N_fixed_data for N = '$N' on '$(date '+%Y-%m-%d-%Hh%M')'.\n' | tee -a $logfile
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#! /bin/zsh
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# For given N (L) this
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# computes the smoothened dsfs and produces the animated figure
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# for a `c_scan_N_fixed` run.
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if [[ $# -ne 6 ]]; then
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echo "Arguments needed: whichDSF, kBT, target_sumrule, N, nkmax (max momentum in units of kF/4), width."
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exit 1
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fi
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if [[ $1 != 'd' && $1 != 'g' && $1 != 'o' ]]; then
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echo "Only the d, g and o scanning options are implemented."
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exit 1
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fi
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if [[ $2 -lt 0 ]]; then
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echo "Temperature kBT must be > 0."
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exit 1
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fi
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if [[ $3 -lt 0 || $3 -gt 1 ]]; then
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echo "Requirement: 0 < target_sumrule < 1."
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exit 1
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fi
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if [[ $4 -lt 0 ]]; then
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echo "N must be > 0."
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exit 1
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fi
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if [[ $5 -lt 0 ]]; then
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echo "nkmax must be > 0."
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exit 1
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fi
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if [[ $6 -lt 0 ]]; then
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echo "width must be > 0."
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exit 1
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fi
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||||
|
||||
whichDSF=$1
|
||||
kBT=$2
|
||||
target_sumrule=$3
|
||||
N=$4
|
||||
nkmax=$5
|
||||
width=$6
|
||||
|
||||
correlator='rho-rho'
|
||||
if [[ $whichDSF == 'o' ]]; then
|
||||
correlator='psidag-psi'
|
||||
elif [[ $whichDSF == 'g' ]]; then
|
||||
correlator='psi-psidag'
|
||||
fi
|
||||
|
||||
iKmax=$(($nkmax * $N/8))
|
||||
|
||||
ommin=0
|
||||
ommax=$(($nkmax*$nkmax)) # use mid-point between upper and lower branch of 1ph continuum
|
||||
Nom=1000
|
||||
|
||||
# store location for these runs
|
||||
dirstore='Lieb-Liniger/'$correlator'/T_'$kBT'/c_scan_N_fixed/k_0_to_'${(l:2::0:)nkmax}'kFo4/sr_'$target_sumrule'/store'
|
||||
|
||||
# List of interactions: fractional powers of 2
|
||||
clist_raw=()
|
||||
for nc in {-160..160}
|
||||
do
|
||||
clist_raw=($clist_raw $(( 2**($nc/16.) )))
|
||||
done
|
||||
# Now cast the integer values to true integers
|
||||
zmodload zsh/mathfunc
|
||||
clist=()
|
||||
for c in $clist_raw
|
||||
do
|
||||
if [[ $((floor($c))) == $((ceil($c))) ]]; then
|
||||
clist=($clist $((int($c))))
|
||||
else
|
||||
clist=($clist $c)
|
||||
fi
|
||||
done
|
||||
|
||||
basedir="$(pwd)"
|
||||
|
||||
for c in $clist
|
||||
do
|
||||
echo '** Starting computation of DSFs for c =' $c', N = '$N
|
||||
# First construct the dsfs
|
||||
|
||||
dir=$dirstore'/data/N_'$N'/c_'$c # dir='Lieb-Liniger/'$correlator'/T_'$kBT'/c_scan_N_fixed/k_0_to_'${(l:2::0:)nkmax}'kFo4/sr_'$target_sumrule'/store/data/N_'$N'/c_'$c
|
||||
cd $dir
|
||||
Smoothen_LiebLin_DSF_Scaled $whichDSF $c $N $N 0 $iKmax $kBT 0 $ommin $ommax $Nom $width
|
||||
cd $basedir
|
||||
echo ' Successfully computed DSFs for c =' $c', N = '$N'.\n'
|
||||
done
|
||||
|
|
@ -0,0 +1,75 @@
|
|||
#! /bin/zsh
|
||||
|
||||
# For given N (L) this
|
||||
# computes the smoothened dsfs and produces the animated figure
|
||||
# for a `c_scan_N_fixed` run.
|
||||
|
||||
if [[ $# -ne 6 ]]; then
|
||||
echo "Arguments needed: whichDSF, kBT, target_sumrule, N, nkmax (max momentum in units of kF/4), width."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
if [[ $1 != 'd' && $1 != 'g' && $1 != 'o' ]]; then
|
||||
echo "Only the d, g and o scanning options are implemented."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
if [[ $2 -lt 0 ]]; then
|
||||
echo "Temperature kBT must be > 0."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
if [[ $3 -lt 0 || $3 -gt 1 ]]; then
|
||||
echo "Requirement: 0 < target_sumrule < 1."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
if [[ $4 -lt 0 ]]; then
|
||||
echo "N must be > 0."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
if [[ $5 -lt 0 ]]; then
|
||||
echo "nkmax must be > 0."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
if [[ $6 -lt 0 ]]; then
|
||||
echo "width must be > 0."
|
||||
exit 1
|
||||
fi
|
||||
|
||||
|
||||
whichDSF=$1
|
||||
kBT=$2
|
||||
target_sumrule=$3
|
||||
N=$4
|
||||
nkmax=$5
|
||||
width=$6
|
||||
|
||||
correlator='rho-rho'
|
||||
if [[ $whichDSF == 'o' ]]; then
|
||||
correlator='psidag-psi'
|
||||
elif [[ $whichDSF == 'g' ]]; then
|
||||
correlator='psi-psidag'
|
||||
fi
|
||||
|
||||
iKmax=$(($nkmax * $N/8))
|
||||
|
||||
ommin=0
|
||||
ommax=$(($nkmax*$nkmax)) # use mid-point between upper and lower branch of 1ph continuum
|
||||
Nom=1000
|
||||
|
||||
# store location for these runs
|
||||
dirstore='Lieb-Liniger/'$correlator'/T_'$kBT'/c_scan_N_fixed/k_0_to_'${(l:2::0:)nkmax}'kFo4/sr_'$target_sumrule'/store'
|
||||
|
||||
basedir="$(pwd)"
|
||||
|
||||
# Now create the animation
|
||||
echo '** Animating c_scan_N_fixed for N = '$N'...'
|
||||
dirplots=$dirstore'/plots/N_'$N
|
||||
mkdir -p $dirplots
|
||||
cd $dirplots
|
||||
c_scan_N_fixed_animation.py $N $width
|
||||
cd $basedir
|
||||
echo '** Successfully animated c_scan_N_fixed for N = '$N'.\n'
|
||||
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